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1

RNA polymerase structure and function at lac operon

Sergei Borukhov, Jookyung Lee

Journal:

Comptes Rendus Biologies

Year:

2005

Language:

english

File:

PDF, 1.13 MB

english, 2005

2

Bacterial transcription elongation factors: new insights into molecular mechanism of action

Sergei Borukhov, Jookyung Lee, Oleg Laptenko

Journal:

Molecular Microbiology

Year:

2005

Language:

english

File:

PDF, 1.16 MB

english, 2005

3

Single-Molecule Approaches Reveal the Idiosyncrasies of RNA Polymerases

Jordanka Zlatanova, William T. McAllister, Sergei Borukhov, Sanford H. Leuba

Journal:

Year:

2006

Language:

english

File:

PDF, 705 KB

english, 2006

4

Bacterial RNA Polymerase-DNA Interaction—The Driving Force of Gene Expression and the Target for Drug Action

Lee, Jookyung, Borukhov, Sergei

Journal:

Frontiers in Molecular Biosciences

Year:

2016

Language:

english

File:

PDF, 3.06 MB

english, 2016

5

Control of the respiratory metabolism of Thermus thermophilus by the nitrate respiration conjugative element NCE

Felipe Cava, Oleg Laptenko, Sergei Borukhov, Zahra Chahlafi, Emilio Blas-Galindo, Paulino Gómez-Puertas, José Berenguer

Journal:

Molecular Microbiology

Year:

2007

Language:

english

File:

PDF, 481 KB

english, 2007

6

10.1038/29703

Pestova, Tatyana V., Borukhov, Sergei I., Hellen, Christopher U. T.

Journal:

Year:

1998

Language:

english

File:

PDF, 355 KB

english, 1998

7

Crystal structure of the GreA transcript cleavage factor from Escherichia coli

Stebbins, Charles E., Borukhov, Sergei, Orlova, Marianna, Polyakov, Andrey, Goldfarb, Alex, Darst, Seth A.

Journal:

Year:

1995

File:

PDF, 752 KB

1995

8

Crystal structure of a bacterial RNA polymerase holoenzyme at 2.6 Å resolution

Vassylyev, Dmitry G., Sekine, Shun-ichi, Laptenko, Oleg, Lee, Jookyung, Vassylyeva, Marina N., Borukhov, Sergei, Yokoyama, Shigeyuki

Journal:

Year:

2002

Language:

english

File:

PDF, 1.12 MB

english, 2002

9

pH-dependent conformational switch activates the inhibitor of transcription elongation

Laptenko, Oleg, Kim, Seung-Sup, Lee, Jookyung, Starodubtseva, Marina, Cava, Fellipe, Berenguer, Jose, Kong, Xiang-Peng, Borukhov, Sergei

Journal:

The EMBO Journal

Year:

2006

Language:

english

File:

PDF, 482 KB

english, 2006

10

Crystallization of GreA, a Transcript Cleavage Factor from Escherichia coli

Seth A. Darst, Charles E. Stebbins, Sergei Borukhov, Marianna Orlova, Guoha Feng, Robert Landick, Alex Goldfarb

Journal:

Journal of Molecular Biology

Year:

1994

File:

PDF, 231 KB

1994

11

Distinct functions of N and C-terminal domains of GreA, an Escherichia coli transcript cleavage factor

Dmitry Koulich, Vadim Nikiforov, Sergei Borukhov

Journal:

Journal of Molecular Biology

Year:

1998

Language:

english

File:

PDF, 320 KB

english, 1998

12

Visualization of the binding site for the transcript cleavage factor GreB on Escherichia coli RNA polymerase

Andrey Polyakov, Catherine Richter, Arun Malhotra, Dmitry Koulich, Sergei Borukhov, Seth A Darst

Journal:

Journal of Molecular Biology

Year:

1998

Language:

english

File:

PDF, 1.26 MB

english, 1998

13

Molecular Mechanism of Transcription Inhibition by Peptide Antibiotic Microcin J25

Karen Adelman, Julia Yuzenkova, Arthur La Porta, Nikolay Zenkin, Jookyung Lee, John T Lis, Sergei Borukhov, Michelle D Wang, Konstantin Severinov

Journal:

Year:

2004

Language:

english

File:

PDF, 428 KB

english, 2004

14

An Allosteric Path to Transcription Termination

Vitaly Epshtein, Christopher J. Cardinale, Andrei E. Ruckenstein, Sergei Borukhov, Evgeny Nudler

Journal:

Year:

2007

Language:

english

File:

PDF, 1.38 MB

english, 2007

15

RNA polymerase: the vehicle of transcription

Sergei Borukhov, Evgeny Nudler

Journal:

Trends in Microbiology

Year:

2008

Language:

english

File:

PDF, 1.50 MB

english, 2008

16

Role of the RNA polymerase sigma subunit in transcription initiation

Sergei Borukhov, Konstantin Severinov

Journal:

Research in Microbiology

Year:

2002

Language:

english

File:

PDF, 260 KB

english, 2002

17

RNA polymerase holoenzyme: structure, function and biological implications

Sergei Borukhov, Evgeny Nudler

Journal:

Current Opinion in Microbiology

Year:

2003

Language:

english

File:

PDF, 453 KB

english, 2003

18

Transcript cleavage factors from E. coli

Sergei Borukhov, Valery Sagitov, Alex Goldfarb

Journal:

Year:

1993

Language:

english

File:

PDF, 2.45 MB

english, 1993

19

The Molecular Mechanism of Aminopropylation of Peptide-Nucleotide Antibiotic Microcin C

Kulikovsky, Alexey, Serebryakova, Marina, Bantysh, Olga, Metlitskaya, Anastasia, Borukhov, Sergei, Severinov, Konstantin, Dubiley, Svetlana

Journal:

Journal of the American Chemical Society

Year:

2014

Language:

english

File:

PDF, 1.19 MB

english, 2014

20

Coupling of Downstream RNA Polymerase–Promoter Interactions with Formation of Catalytically Competent Transcription Initiation Complex

Mekler, Vladimir, Minakhin, Leonid, Borukhov, Sergei, Mustaev, Arkady, Severinov, Konstantin

Journal:

Journal of Molecular Biology

Year:

2014

Language:

english

File:

PDF, 1.19 MB

english, 2014

21

DksA regulates RNA polymerase in Escherichia coli through a network of interactions in the secondary channel that includes Sequence Insertion 1

Parshin, Andrey, Shiver, Anthony L., Lee, Jookyung, Ozerova, Maria, Schneidman-Duhovny, Dina, Gross, Carol A., Borukhov, Sergei

Journal:

Proceedings of the National Academy of Sciences

Year:

2015

Language:

english

File:

PDF, 2.38 MB

english, 2015

22

A β Subunit Mutation Disrupting the Catalytic Function of Escherichia coli RNA Polymerase

Jookyung Lee, Mikhail Kashlev, Sergei Borukhov and Alex Goldfarb

Journal:

Proceedings of the National Academy of Sciences

Year:

1991

Language:

english

File:

PDF, 1.12 MB

english, 1991

23

GreA Protein: A Transcription Elongation Factor from Escherichia coli

Sergei Borukhov, Andrey Polyakov, Vadim Nikiforov and Alex Goldfarb

Journal:

Proceedings of the National Academy of Sciences

Year:

1992

Language:

english

File:

PDF, 1.01 MB

english, 1992

24

Intrinsic Transcript Cleavage Activity of RNA Polymerase

Marianna Orlova, Janet Newlands, Asis Das, Alex Goldfarb and Sergei Borukhov

Journal:

Proceedings of the National Academy of Sciences

Year:

1995

Language:

english

File:

PDF, 649 KB

english, 1995

25

[Methods in Enzymology] Ribonucleases - Part B Volume 342 || Escherichia coli Transcript Cleavage Factors GreA and GreB: Functions and Mechanisms of Action

Borukhov, Sergei

Year:

2001

Language:

english

File:

PDF, 1.77 MB

english, 2001

26

A non-canonical multisubunit RNA polymerase encoded by a giant bacteriophage

Yakunina, Maria, Artamonova, Tatyana, Borukhov, Sergei, Makarova, Kira S., Severinov, Konstantin, Minakhin, Leonid

Journal:

Nucleic Acids Research

Year:

2015

Language:

english

File:

PDF, 2.92 MB

english, 2015

27

Pausing in Escherichia coli Transcription Initiation

Lerner, Eitan, Chung, Sangyoon, Allen, Benjamin, Shuang, Wang, Jookyung, Lee J., Winson Shijia, Lu, Wilson Logan, Grimaud, Ingargiola, Antonino, Alhadid, Yazan, Borukhov, Sergei, Strick, Terence, Taat

Journal:

Biophysical Journal

Year:

2016

Language:

english

File:

PDF, 42 KB

english, 2016

28

[Methods in Enzymology] RNA Polymerase and Associated Factors, Part B Volume 274 || Purification and assay of Escherichia coli transcript cleavage factors GreA and GreB

Borukhov, Sergei

Year:

1996

Language:

english

File:

PDF, 677 KB

english, 1996

29

Backtracked and paused transcription initiation intermediate of Escherichia coli RNA polymerase

Lerner, Eitan, Chung, SangYoon, Allen, Benjamin L., Wang, Shuang, Lee, Jookyung, Lu, Shijia W., Grimaud, Logan W., Ingargiola, Antonino, Michalet, Xavier, Alhadid, Yazan, Borukhov, Sergei, Strick, Ter

Journal:

Proceedings of the National Academy of Sciences

Year:

2016

Language:

english

File:

PDF, 1.49 MB

english, 2016

30

Different types of pausing modes during transcription initiation

Lerner, Eitan, Ingargiola, Antonino, Lee, Jookyung J., Borukhov, Sergei, Michalet, Xavier, Weiss, Shimon

Journal:

Year:

2017

Language:

english

File:

PDF, 1.25 MB

english, 2017

31

Studying transcription initiation by RNA polymerase with diffusion-based single-molecule fluorescence

Alhadid, Yazan, Chung, SangYoon, Lerner, Eitan, Taatjes, Dylan J., Borukhov, Sergei, Weiss, Shimon

Journal:

Protein Science

Year:

2017

Language:

english

File:

PDF, 755 KB

english, 2017

32

A non-canonical multisubunit RNA polymerase encoded by the AR9 phage recognizes the template strand of its uracil-containing promoters

Sokolova, Maria, Borukhov, Sergei, Lavysh, Daria, Artamonova, Tatjana, Khodorkovskii, Mikhail, Severinov, Konstantin

Journal:

Nucleic Acids Research

Year:

2017

Language:

english

File:

PDF, 2.37 MB

english, 2017

33

Histidine-Triad Hydrolases Provide Resistance to Peptide-Nucleotide Antibiotics

Yagmurov, Eldar, Tsibulskaya, Darya, Livenskyi, Alexey, Serebryakova, Marina, Wolf, Yury I., Borukhov, Sergei, Severinov, Konstantin, Dubiley, Svetlana, Gottesman, Susan

Journal:

Year:

2020

File:

PDF, 1.82 MB

2020

34

Mechanism of translation inhibition by type II GNAT toxin AtaT2

Ovchinnikov, Stepan V, Bikmetov, Dmitry, Livenskyi, Alexei, Serebryakova, Marina, Wilcox, Brendan, Mangano, Kyle, Shiriaev, Dmitrii I, Osterman, Ilya A, Sergiev, PetrÂ V, Borukhov, Sergei, Vazquez-Las

Journal:

Nucleic Acids Research

Year:

2020

File:

PDF, 3.79 MB

2020

35

Structure and function of virion RNA polymerase of a crAss-like phage

Drobysheva, Arina V., Panafidina, Sofia A., Kolesnik, Matvei V., Klimuk, Evgeny I., Minakhin, Leonid, Yakunina, Maria V., Borukhov, Sergei, Nilsson, Emelie, Holmfeldt, Karin, Yutin, Natalya, Makarova,

Journal:

Year:

2020

File:

PDF, 7.94 MB

2020